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JT27_06320 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_06320" - (2Fe-2S)-binding protein in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_06320(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (347 aa)    
Predicted Functional Partners:
JT27_06325
Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (401 aa)
   
   
  0.864
JT27_05180
Iron-sulfur protein; Derived by automated computational analysis using gene prediction method- Protein Homology (336 aa)
 
   
  0.811
JT27_08645
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (324 aa)
 
   
  0.675
JT27_11195
Ferredoxin; Derived by automated computational analysis using gene prediction method- Protein Homology (321 aa)
 
   
  0.653
JT27_04970
Ferredoxin; Derived by automated computational analysis using gene prediction method- Protein Homology (322 aa)
 
   
  0.584
JT27_06315
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (315 aa)
              0.564
JT27_15065
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (160 aa)
 
 
  0.514
JT27_04960
Phenylpropionate dioxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (160 aa)
 
 
  0.466
JT27_12185
Protocatechuate 3,4-dioxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (279 aa)
 
     
  0.444
JT27_17105
Endoribonuclease L-PSP; Derived by automated computational analysis using gene prediction method- Protein Homology (163 aa)
   
          0.412
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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