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JT27_06330 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_06330" - Transcriptional regulator in Alcaligenes faecalis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
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[Homology]
Score
JT27_06330Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (294 aa)    
Predicted Functional Partners:
JT27_02530
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (302 aa)
   
   
  0.716
JT27_03335
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (312 aa)
   
          0.681
JT27_07450
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (300 aa)
   
        0.672
JT27_06335
Glutathione S-transferase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the GST superfamily (207 aa)
 
          0.644
JT27_03345
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (298 aa)
   
          0.636
JT27_11160
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (311 aa)
   
          0.634
JT27_14520
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (317 aa)
   
          0.630
JT27_06340
Luciferase; Derived by automated computational analysis using gene prediction method- Protein Homology (343 aa)
 
          0.626
JT27_15850
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (290 aa)
   
          0.614
JT27_01085
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (304 aa)
   
   
  0.595
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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