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JT27_06515 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_06515" - SURF1-like protein in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_06515SURF1-like protein; Derived by automated computational analysis using gene prediction method- Protein Homology (260 aa)    
Predicted Functional Partners:
JT27_06505
Cytochrome C oxidase subunit I; Derived by automated computational analysis using gene prediction method- Protein Homology (357 aa)
 
 
  0.986
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily (297 aa)
 
 
  0.978
JT27_06510
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (209 aa)
 
   
  0.971
JT27_06545
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) (386 aa)
 
 
  0.882
JT27_06520
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (68 aa)
 
          0.863
JT27_06525
MFS transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (291 aa)
 
   
  0.844
JT27_06540
Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B (535 aa)
 
 
  0.787
JT27_06865
Derived by automated computational analysis using gene prediction method- Protein Homology (282 aa)
   
 
  0.652
JT27_14750
Zinc protease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the peptidase M16 family (946 aa)
   
 
  0.568
JT27_14885
Derived by automated computational analysis using gene prediction method- Protein Homology (117 aa)
   
          0.533
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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