STRINGSTRING
JT27_06520 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_06520" - Membrane protein in Alcaligenes faecalis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_06520Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (68 aa)    
Predicted Functional Partners:
JT27_06510
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (209 aa)
 
          0.915
JT27_06515
SURF1-like protein; Derived by automated computational analysis using gene prediction method- Protein Homology (260 aa)
 
          0.863
JT27_06505
Cytochrome C oxidase subunit I; Derived by automated computational analysis using gene prediction method- Protein Homology (357 aa)
 
          0.858
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily (297 aa)
 
          0.812
JT27_06530
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (74 aa)
   
          0.705
JT27_04410
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (176 aa)
   
          0.665
JT27_14885
Derived by automated computational analysis using gene prediction method- Protein Homology (117 aa)
   
          0.616
JT27_16045
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (177 aa)
   
          0.564
JT27_14890
Cytochrome; Derived by automated computational analysis using gene prediction method- Protein Homology (122 aa)
   
          0.564
JT27_06525
MFS transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (291 aa)
   
          0.546
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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