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JT27_06555 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_06555" - Uncharacterized protein in Alcaligenes faecalis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_06555Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (290 aa)    
Predicted Functional Partners:
JT27_14015
Phasin (PHA-granule associated protein); Derived by automated computational analysis using gene prediction method- Protein Homology (199 aa)
   
          0.784
JT27_14040
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (200 aa)
   
          0.771
JT27_06530
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (74 aa)
 
          0.770
JT27_17650
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (258 aa)
   
          0.769
glmU
Bifunctional protein GlmU; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain (456 aa)
              0.763
JT27_09615
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (405 aa)
   
          0.735
JT27_13995
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (272 aa)
   
          0.728
JT27_04555
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (115 aa)
   
          0.704
JT27_06550
NUDIX hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (275 aa)
              0.694
JT27_16575
Glycosyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (586 aa)
   
          0.693
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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