STRINGSTRING
JT27_07115 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_07115" - Membrane protein in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_07115Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (1199 aa)    
Predicted Functional Partners:
JT27_07110
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (418 aa)
 
   
  0.991
JT27_07105
Type VI secretion protein; Derived by automated computational analysis using gene prediction method- Protein Homology (448 aa)
 
   
  0.980
JT27_07120
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (247 aa)
 
   
  0.977
JT27_07100
Type VI secretion lipofamily protein; Derived by automated computational analysis using gene prediction method- Protein Homology (162 aa)
 
   
  0.967
JT27_07125
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (536 aa)
 
   
  0.930
JT27_07080
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (628 aa)
 
   
  0.929
JT27_07065
EvpB family type VI secretion protein; Derived by automated computational analysis using gene prediction method- Protein Homology (497 aa)
 
   
  0.900
JT27_07085
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (347 aa)
 
   
  0.875
JT27_07075
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (180 aa)
 
   
  0.869
JT27_07025
Type VI secretion protein Vgr; Derived by automated computational analysis using gene prediction method- Protein Homology (783 aa)
 
   
  0.868
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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