STRINGSTRING
JT27_07225 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_07225" - Glycosyl transferase family 1 in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_07225Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method- Protein Homology (438 aa)    
Predicted Functional Partners:
JT27_07230
Spore coat protein; Derived by automated computational analysis using gene prediction method- Protein Homology (361 aa)
   
  0.981
JT27_07220
Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method- Protein Homology (328 aa)
 
     
  0.934
JT27_07215
Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method- Protein Homology (319 aa)
 
          0.924
JT27_07235
Glycosyl transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (492 aa)
   
   
  0.828
JT27_07240
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (257 aa)
   
        0.813
JT27_07245
Capsular biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (518 aa)
         
  0.813
JT27_07190
UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family (420 aa)
 
   
  0.684
JT27_07185
UDP-N-acetylglucosamine 2-epimerase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UDP-N-acetylglucosamine 2-epimerase family (373 aa)
 
   
  0.634
JT27_11790
Vi polysaccharide biosynthesis protein VipB/TviC; Derived by automated computational analysis using gene prediction method- Protein Homology (341 aa)
 
 
  0.460
JT27_07200
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (651 aa)
          0.430
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
Server load: low (10%) [HD]