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selD protein (Alcaligenes faecalis) - STRING interaction network
"selD" - Selenide, water dikinase in Alcaligenes faecalis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
selDSelenide, water dikinase; Synthesizes selenophosphate from selenide and ATP (344 aa)    
Predicted Functional Partners:
selU
tRNA 2-selenouridine synthase; Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA (364 aa)
   
  0.995
selA
L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis (472 aa)
 
   
  0.987
JT27_00040
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family (415 aa)
     
  0.906
JT27_14950
Thioredoxin reductase; Catalyzes the transfer of electrons from NADPH to thioredoxin; FAD/NAD(P) binding; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family (318 aa)
     
 
  0.905
JT27_07320
Translation elongation factor; Derived by automated computational analysis using gene prediction method- Protein Homology (639 aa)
 
   
  0.838
JT27_07345
Formate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family (811 aa)
 
     
  0.743
JT27_13525
Nitroreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (189 aa)
 
        0.696
JT27_07300
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (362 aa)
              0.633
JT27_13325
Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family (788 aa)
           
  0.589
putA
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family (1257 aa)
           
  0.576
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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