STRINGSTRING
JT27_07385 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_07385" - TonB-dependent receptor in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_07385TonB-dependent receptor; Derived by automated computational analysis using gene prediction method- Protein Homology (703 aa)    
Predicted Functional Partners:
JT27_07365
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (282 aa)
 
          0.883
JT27_07370
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (259 aa)
 
          0.806
JT27_07375
Nitrate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (233 aa)
              0.786
JT27_07380
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (147 aa)
              0.770
JT27_01005
Receptor; Derived by automated computational analysis using gene prediction method- Protein Homology (1055 aa)
 
   
  0.675
JT27_05590
Transmembrane sensor; Derived by automated computational analysis using gene prediction method- Protein Homology (250 aa)
 
 
  0.623
JT27_09560
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (331 aa)
 
 
  0.504
JT27_07510
Energy transducer TonB; Derived by automated computational analysis using gene prediction method- Protein Homology (239 aa)
 
 
  0.500
JT27_12370
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (331 aa)
 
 
  0.499
JT27_07475
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (328 aa)
 
 
  0.497
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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