STRINGSTRING
JT27_07425 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_07425" - Membrane protein in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_07425Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (145 aa)    
Predicted Functional Partners:
JT27_07420
Tricarboxylic transport membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (330 aa)
 
        0.967
JT27_07430
Tripartite tricarboxylate transporter TctA; Derived by automated computational analysis using gene prediction method- Protein Homology (507 aa)
 
        0.967
JT27_07435
Ammonia monooxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (346 aa)
 
        0.843
JT27_07415
Histidine kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (468 aa)
 
          0.624
JT27_01170
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (506 aa)
 
        0.573
JT27_19070
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (501 aa)
 
        0.551
JT27_07410
Transcriptional activator of tricarboxylate transport system genes; Derived by automated computational analysis using gene prediction method- Protein Homology (227 aa)
 
          0.497
AFA_03375
Barstar family protein 2; Derived by automated computational analysis using gene prediction method- Protein Homology (155 aa)
   
          0.441
JT27_17695
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (420 aa)
   
          0.420
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
Server load: low (9%) [HD]