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JT27_07700 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_07700" - ABC transporter in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
JT27_07700ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (243 aa)    
Predicted Functional Partners:
JT27_07695
Nitrate ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (244 aa)
   
  0.972
JT27_07690
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (337 aa)
 
   
  0.865
JT27_05870
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (249 aa)
   
  0.682
JT27_02730
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (261 aa)
   
  0.678
JT27_02735
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (245 aa)
   
  0.641
JT27_16800
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (254 aa)
   
  0.635
JT27_04085
Taurine ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (279 aa)
   
  0.627
JT27_02545
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (255 aa)
   
  0.597
JT27_20150
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (246 aa)
   
  0.595
ftsY
Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components (412 aa)
   
          0.575
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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