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JT27_07970 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_07970" - Uncharacterized protein in Alcaligenes faecalis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
JT27_07970Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (929 aa)    
Predicted Functional Partners:
JT27_05960
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (1342 aa)
   
   
  0.831
JT27_14145
Lipoprotein PlpD; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ompA family (257 aa)
 
   
  0.689
JT27_11650
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (599 aa)
   
     
  0.635
JT27_01005
Receptor; Derived by automated computational analysis using gene prediction method- Protein Homology (1055 aa)
 
   
  0.619
dnaK
Chaperone protein DnaK; Acts as a chaperone (641 aa)
   
 
  0.604
JT27_19135
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (372 aa)
   
   
  0.603
JT27_05750
Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (364 aa)
   
   
  0.598
lon
Lon protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner (821 aa)
     
   
  0.584
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides (652 aa)
 
   
  0.582
bamA
Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (780 aa)
     
   
  0.576
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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