STRINGSTRING
JT27_08000 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_08000" - Allophanate hydrolase in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_08000Allophanate hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (232 aa)    
Predicted Functional Partners:
JT27_07995
Carboxylase; Derived by automated computational analysis using gene prediction method- Protein Homology (337 aa)
 
  0.999
JT27_15330
UPF0271 protein JT27_15330; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UPF0271 (lamB) family (252 aa)
   
  0.997
JT27_03035
Putative hydro-lyase JT27_03035; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the D-glutamate cyclase family (267 aa)
        0.864
JT27_08005
Glyoxalase; Derived by automated computational analysis using gene prediction method- Protein Homology (143 aa)
              0.858
JT27_08015
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method- Protein Homology (236 aa)
   
        0.617
JT27_06885
Metal-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (258 aa)
 
   
  0.610
JT27_08010
Histidine kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (432 aa)
              0.610
JT27_04615
3-methylcrotonyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method- Protein Homology (670 aa)
 
        0.603
JT27_16905
Ammonium transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (413 aa)
           
  0.600
JT27_13865
Urea amidohydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (160 aa)
           
  0.549
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
Server load: low (9%) [HD]