STRINGSTRING
JT27_08105 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_08105" - Uncharacterized protein in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_08105Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (369 aa)    
Predicted Functional Partners:
rnpA
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5’-leader sequence from pre-tRNA to produce the mature 5’-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5’-leader sequence and broadening the substrate specificity of the ribozyme (121 aa)
   
          0.747
JT27_17650
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (258 aa)
   
          0.728
JT27_16105
Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins (340 aa)
   
          0.709
JT27_17255
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (110 aa)
   
          0.694
JT27_13995
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (272 aa)
   
          0.689
JT27_04555
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (115 aa)
   
          0.673
JT27_13990
Thiol-disulfide isomerase; Derived by automated computational analysis using gene prediction method- Protein Homology (129 aa)
   
          0.672
JT27_13370
Outer membrane protein chaperone; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the skp family (184 aa)
   
 
 
  0.649
JT27_16575
Glycosyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (586 aa)
   
          0.649
JT27_11685
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (273 aa)
   
          0.632
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
Server load: low (9%) [HD]