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mrdA protein (Alcaligenes faecalis) - STRING interaction network
"mrdA" - Peptidoglycan D,D-transpeptidase MrdA in Alcaligenes faecalis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrdAPeptidoglycan D,D-transpeptidase MrdA; Catalyzes cross-linking of the peptidoglycan cell wall (619 aa)    
Predicted Functional Partners:
mrdB
Peptidoglycan glycosyltransferase MrdB; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily (380 aa)
 
  0.997
JT27_08355
Cell shape-determining protein MreC; Involved in formation and maintenance of cell shape (293 aa)
 
 
  0.981
AFA_15885
Rod shape-determining protein MreB; Derived by automated computational analysis using gene prediction method- Protein Homology (347 aa)
 
  0.972
JT27_08360
Rod shape-determining protein MreD; Derived by automated computational analysis using gene prediction method- Protein Homology (192 aa)
   
   
  0.898
ftsI
Peptidoglycan D,D-transpeptidase FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily (579 aa)
 
0.881
JT27_02990
Cytochrome C550; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the peptidase S11 family (409 aa)
 
 
  0.879
murE
Multifunctional fusion protein; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan; Belongs to the MurCDEF family. MurE subfamily (925 aa)
 
  0.849
rlmH
Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family (156 aa)
 
   
  0.837
rlpA
Endolytic peptidoglycan transglycosylase RlpA; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides (362 aa)
 
 
  0.804
JT27_06125
Penicillin-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (815 aa)
   
 
  0.771
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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