STRINGSTRING
JT27_08405 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_08405" - ABC transporter ATP-binding protein in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_08405ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (245 aa)    
Predicted Functional Partners:
JT27_08400
Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (364 aa)
  0.989
JT27_08395
Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (395 aa)
   
  0.984
JT27_08390
Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial solute-binding protein 3 family (338 aa)
  0.971
JT27_03095
Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (338 aa)
  0.951
JT27_15865
Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (231 aa)
 
  0.840
JT27_15870
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (231 aa)
 
  0.814
JT27_03170
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (226 aa)
 
  0.813
glnP
Similar to permease component of ABC transporters; mutations impair ability of Escherichia coli to transport and utilize glutamine; Derived by automated computational analysis using gene prediction method- Protein Homology (179 aa)
 
  0.809
JT27_02510
Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (222 aa)
 
  0.806
JT27_02515
Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (223 aa)
 
  0.805
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
Server load: low (9%) [HD]