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AFA_15730 protein (Alcaligenes faecalis) - STRING interaction network
"AFA_15730" - Rubredoxin in Alcaligenes faecalis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFA_15730Rubredoxin; Derived by automated computational analysis using gene prediction method- Protein Homology (54 aa)    
Predicted Functional Partners:
JT27_20110
3-phenylpropionate dioxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (425 aa)
 
  0.838
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (905 aa)
         
  0.739
thiE
Thiamine-phosphate synthase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP); Belongs to the thiamine-phosphate synthase family (228 aa)
              0.723
JT27_08500
Phosphomethylpyrimidine kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (265 aa)
              0.723
JT27_08510
UPF0301 protein JT27_08510; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UPF0301 (AlgH) family (173 aa)
              0.714
JT27_08515
Putative pre-16S rRNA nuclease; Could be a nuclease involved in processing of the 5’-end of pre-16S rRNA (135 aa)
              0.698
JT27_03380
Dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (292 aa)
   
        0.688
hemL
Glutamate-1-semialdehyde 2,1-aminomutase; Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; Derived by automated computational analysis using gene prediction method- Protein Homology (427 aa)
              0.668
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (358 aa)
     
   
  0.624
JT27_08780
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family (382 aa)
           
  0.601
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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