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JT27_08940 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_08940" - Uncharacterized protein in Alcaligenes faecalis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_08940Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (152 aa)    
Predicted Functional Partners:
msbA
Lipid A export ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation; Belongs to the ABC transporter superfamily. Lipid exporter (TC 3.A.1.106) family (594 aa)
              0.749
JT27_08960
Proteinase inhibitor; Derived by automated computational analysis using gene prediction method- Protein Homology (94 aa)
              0.506
JT27_08955
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (254 aa)
              0.506
JT27_08950
Heptosyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (301 aa)
              0.506
JT27_08935
Cell division protein ZipA; Derived by automated computational analysis using gene prediction method- Protein Homology (159 aa)
              0.479
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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