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msbA protein (Alcaligenes faecalis) - STRING interaction network
"msbA" - Lipid A export ATP-binding/permease protein MsbA in Alcaligenes faecalis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
msbALipid A export ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation; Belongs to the ABC transporter superfamily. Lipid exporter (TC 3.A.1.106) family (594 aa)    
Predicted Functional Partners:
JT27_08940
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (152 aa)
              0.749
JT27_08950
Heptosyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (301 aa)
 
     
  0.683
JT27_08955
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (254 aa)
 
          0.619
dnaK
Chaperone protein DnaK; Acts as a chaperone (641 aa)
   
 
 
  0.585
JT27_08960
Proteinase inhibitor; Derived by automated computational analysis using gene prediction method- Protein Homology (94 aa)
              0.585
serS
Serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) (448 aa)
 
 
      0.471
JT27_09070
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (238 aa)
   
 
      0.470
leuS
leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; Derived by automated computational [...] (886 aa)
   
      0.446
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (905 aa)
   
 
  0.439
JT27_08530
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (386 aa)
 
 
      0.438
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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