STRINGSTRING
rpiA protein (Alcaligenes faecalis) - STRING interaction network
"rpiA" - Ribose-5-phosphate isomerase A in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpiARibose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate (227 aa)    
Predicted Functional Partners:
JT27_11110
Transketolase; Catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the transketolase family (681 aa)
 
  0.974
JT27_02850
Ribulose-phosphate 3-epimerase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ribulose-phosphate 3-epimerase family (231 aa)
   
  0.968
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily (316 aa)
   
  0.938
JT27_00185
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (312 aa)
 
 
  0.933
JT27_11765
Phosphoglucomutase; Catalyzes the interconversion of alpha-D-mannose 1-phosphate to alpha-D-mannose 6-phosphate and alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology (462 aa)
   
 
  0.911
JT27_09030
Arsenate reductase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ArsC family (114 aa)
         
  0.874
glmS
Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source (608 aa)
 
   
  0.774
phoU
Phosphate-specific transport system accessory protein PhoU; Plays a role in the regulation of phosphate uptake (244 aa)
              0.742
kdkA
3-deoxy-D-manno-octulosonic acid kinase; Catalyzes the ATP-dependent phosphorylation of the 3- deoxy-D-manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position; Belongs to the protein kinase superfamily. KdkA/RfaP family (229 aa)
   
   
  0.740
pgk
Phosphoglycerate kinase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the phosphoglycerate kinase family (389 aa)
 
   
  0.698
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
Server load: low (9%) [HD]