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kdkA protein (Alcaligenes faecalis) - STRING interaction network
"kdkA" - 3-deoxy-D-manno-octulosonic acid kinase in Alcaligenes faecalis
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second shell of interactors
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proteins of unknown 3D structure
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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kdkA3-deoxy-D-manno-octulosonic acid kinase; Catalyzes the ATP-dependent phosphorylation of the 3- deoxy-D-manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position; Belongs to the protein kinase superfamily. KdkA/RfaP family (229 aa)    
Predicted Functional Partners:
JT27_03020
3-deoxy-D-manno-octulosonic acid transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (441 aa)
     
  0.971
JT27_09075
Alanine racemase; Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids; Belongs to the alanine racemase family (376 aa)
         
  0.849
JT27_09030
Arsenate reductase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ArsC family (114 aa)
 
     
  0.787
JT27_09090
Zeta-carotene desaturase; Derived by automated computational analysis using gene prediction method- Protein Homology (428 aa)
   
   
  0.771
JT27_09070
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (238 aa)
 
        0.758
rpiA
Ribose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate (227 aa)
   
   
  0.740
radA
DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3’ invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA’s homology-searching function (461 aa)
              0.717
JT27_09060
Probable membrane transporter protein; Derived by automated computational analysis using gene prediction method- Protein Homology (259 aa)
              0.717
JT27_09050
Putrescine-binding periplasmic protein; Required for the activity of the bacterial periplasmic transport system of putrescine (368 aa)
         
  0.630
tsaD
tRNA N6-adenosine threonylcarbamoyltransferase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family (352 aa)
   
 
  0.587
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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