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rimP protein (Alcaligenes faecalis) - STRING interaction network
"rimP" - Ribosome maturation factor RimP in Alcaligenes faecalis
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second shell of interactors
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proteins of unknown 3D structure
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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rimPRibosome maturation factor RimP; Required for maturation of 30S ribosomal subunits (163 aa)    
Predicted Functional Partners:
nusA
Transcription termination/antitermination protein NusA; Participates in both transcription termination and antitermination (494 aa)
 
        0.993
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (1016 aa)
   
   
  0.861
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (250 aa)
   
   
  0.837
rbfA
Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5’-terminal helix region of 16S rRNA (137 aa)
   
 
  0.790
JT27_09270
GTP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (605 aa)
   
        0.750
guaB
Inosine-5’-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5’-phosphate (IMP) to xanthosine 5’-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth; Belongs to the IMPDH/GMPR family (486 aa)
   
   
  0.724
JT27_09300
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (72 aa)
              0.723
JT27_09305
Pseudouridine synthase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the pseudouridine synthase RsuA family (605 aa)
              0.652
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP (528 aa)
           
  0.545
rimM
Ribosome maturation factor RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family (199 aa)
   
 
  0.538
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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