STRINGSTRING
JT27_10055 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_10055" - TonB-dependent receptor in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_10055TonB-dependent receptor; Derived by automated computational analysis using gene prediction method- Protein Homology (731 aa)    
Predicted Functional Partners:
JT27_10060
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (370 aa)
   
        0.840
JT27_06590
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (844 aa)
 
   
  0.599
JT27_17705
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (799 aa)
 
   
  0.595
JT27_12375
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method- Protein Homology (811 aa)
 
   
  0.575
JT27_07480
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (784 aa)
 
   
  0.568
JT27_06160
TonB-dependent outer membrane receptor; Derived by automated computational analysis using gene prediction method- Protein Homology (792 aa)
 
   
  0.549
JT27_04200
Peptidase; Derived by automated computational analysis using gene prediction method- Protein Homology (545 aa)
 
   
  0.531
JT27_19135
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (372 aa)
   
 
  0.519
JT27_04400
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method- Protein Homology (701 aa)
   
 
  0.509
mutS
DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity (878 aa)
              0.500
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
Server load: low (10%) [HD]