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JT27_10405 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_10405" - ABC transporter substrate-binding protein in Alcaligenes faecalis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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[Homology]
Score
JT27_10405ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (346 aa)    
Predicted Functional Partners:
JT27_10400
Mannosyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (268 aa)
 
   
  0.979
JT27_10395
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (264 aa)
 
   
  0.977
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO (203 aa)
              0.595
JT27_10415
Nucleoid-associated protein JT27_10415; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection (108 aa)
              0.586
JT27_10420
DNA polymerase III subunit gamma/tau; Derived by automated computational analysis using gene prediction method- Protein Homology (808 aa)
              0.496
JT27_02725
Nitrate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (254 aa)
 
   
  0.483
JT27_02540
Nitrate ABC transporter ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology (253 aa)
 
   
  0.435
JT27_16795
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (247 aa)
 
   
  0.419
JT27_20145
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (259 aa)
 
   
  0.415
JT27_20150
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (246 aa)
 
   
  0.414
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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