STRINGSTRING
JT27_10925 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_10925" - Cytochrome oxidase in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_10925Cytochrome oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology (349 aa)    
Predicted Functional Partners:
JT27_10930
Transmembrane cytochrome oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology (446 aa)
  0.998
JT27_07935
Cytochrome d terminal oxidase subunit 1; Part of the aerobic respiratory chain; catalyzes the ubiquinol to ubiquinone; Derived by automated computational analysis using gene prediction method- Protein Homology (527 aa)
  0.988
JT27_07940
Cytochrome D ubiquinol oxidase subunit II; Derived by automated computational analysis using gene prediction method- Protein Homology (383 aa)
   
   
    0.925
JT27_06875
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (214 aa)
   
 
  0.830
JT27_06870
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (462 aa)
     
 
  0.828
JT27_06865
Derived by automated computational analysis using gene prediction method- Protein Homology (282 aa)
         
  0.807
JT27_10920
Voltage-gated chloride channel protein ClcB; Derived by automated computational analysis using gene prediction method- Protein Homology (582 aa)
   
        0.747
JT27_10915
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (378 aa)
              0.692
JT27_10910
ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method- Protein Homology (608 aa)
              0.692
JT27_07945
Cytochrome bd biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (46 aa)
 
 
  0.646
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
Server load: low (9%) [HD]