STRINGSTRING
JT27_11220 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_11220" - Membrane protein in Alcaligenes faecalis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
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[Homology]
Score
JT27_11220Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (105 aa)    
Predicted Functional Partners:
JT27_11215
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (129 aa)
 
   
  0.829
JT27_08600
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (163 aa)
   
          0.680
JT27_09615
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (405 aa)
   
          0.651
JT27_11225
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (240 aa)
 
          0.634
JT27_08030
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (209 aa)
   
          0.588
JT27_00135
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (95 aa)
 
          0.554
JT27_11210
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (129 aa)
              0.544
JT27_01640
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (132 aa)
 
   
  0.519
JT27_03830
Flagellar protein FliL; Controls the rotational direction of flagella during chemotaxis (173 aa)
   
          0.498
JT27_03025
Heptosyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (333 aa)
   
          0.472
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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