STRINGSTRING
JT27_11825 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_11825" - 4-oxalocrotonate tautomerase in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_118254-oxalocrotonate tautomerase; 4-OT; member of subfamily 5; forms a dimer; the function in the Escherichia coli cell is unknown; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family (61 aa)    
Predicted Functional Partners:
JT27_20300
Dioxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (330 aa)
         
  0.900
JT27_11820
Aldolase; Derived by automated computational analysis using gene prediction method- Protein Homology (253 aa)
              0.808
JT27_11815
Ureidoglycolate lyase; Catalyzes the formation of glyoxylate from (S)-ureidoglycolate; Derived by automated computational analysis using gene prediction method- Protein Homology (170 aa)
              0.677
JT27_02575
2-oxopent-4-enoate hydratase; Derived by automated computational analysis using gene prediction method- Protein Homology (256 aa)
         
  0.590
JT27_08485
2-aminobenzoate-CoA ligase; Derived by automated computational analysis using gene prediction method- Protein Homology (549 aa)
           
  0.549
amn
AMP nucleosidase; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations (500 aa)
           
  0.549
JT27_12585
Porin; Derived by automated computational analysis using gene prediction method- Protein Homology (348 aa)
 
          0.536
JT27_12065
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (345 aa)
   
          0.444
JT27_11810
OHCU decarboxylase; Derived by automated computational analysis using gene prediction method- Protein Homology (176 aa)
              0.424
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (905 aa)
         
  0.418
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
Server load: low (10%) [HD]