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AFA_02645 protein (Alcaligenes faecalis) - STRING interaction network
"AFA_02645" - Heme-degrading domain-containing protein in Alcaligenes faecalis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
AFA_02645Heme-degrading domain-containing protein; Derived by automated computational analysis using gene prediction method- Protein Homology (132 aa)    
Predicted Functional Partners:
JT27_11860
Hydroxypyruvate reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (425 aa)
 
          0.819
JT27_11870
Pyruvate kinase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the pyruvate kinase family (473 aa)
              0.752
glcF
Glycolate oxidase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method- Protein Homology (406 aa)
 
   
  0.738
glcE
Glycolate oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology (347 aa)
 
   
  0.698
JT27_03480
Glycolate oxidase subunit GlcD; Derived by automated computational analysis using gene prediction method- Protein Homology (499 aa)
 
   
  0.553
JT27_11850
Hydroxypyruvate isomerase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the hyi family (262 aa)
 
          0.518
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily (721 aa)
   
   
  0.488
JT27_07980
FAD-linked oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology (1313 aa)
   
   
  0.443
JT27_01005
Receptor; Derived by automated computational analysis using gene prediction method- Protein Homology (1055 aa)
     
 
  0.441
JT27_11855
Tartronate semialdehyde reductase; NADH-dependent; catalyzed the reversible formation of glycerate from tartronate semialdehyde; Derived by automated computational analysis using gene prediction method- Protein Homology (294 aa)
              0.433
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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