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JT27_11880 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_11880" - Uncharacterized protein in Alcaligenes faecalis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_11880Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (211 aa)    
Predicted Functional Partners:
JT27_11885
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (211 aa)
 
          0.975
JT27_11890
Cbb3-type cytochrome C oxidase subunit III; Derived by automated computational analysis using gene prediction method- Protein Homology (195 aa)
 
          0.847
JT27_11900
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (551 aa)
 
          0.787
coq7
2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol; Belongs to the COQ7 family (222 aa)
              0.745
JT27_11895
Cytochrome C oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology (196 aa)
 
          0.744
JT27_04560
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (1192 aa)
   
          0.646
JT27_03615
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (150 aa)
   
          0.575
JT27_13795
Alkyl hydroperoxide reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (176 aa)
   
          0.519
JT27_15535
ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology (84 aa)
   
          0.506
JT27_07355
Globin; Derived by automated computational analysis using gene prediction method- Protein Homology (223 aa)
 
          0.480
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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