STRINGSTRING
JT27_11925 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_11925" - Membrane protein in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_11925Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (409 aa)    
Predicted Functional Partners:
JT27_11930
Lysine decarboxylase; Derived by automated computational analysis using gene prediction method- Protein Homology (757 aa)
   
        0.856
dcd
dCTP deaminase; Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; Derived by automated computational analysis using gene prediction method- Protein Homology (187 aa)
              0.854
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein (124 aa)
              0.598
JT27_11950
Iron-sulfur cluster carrier protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP (361 aa)
   
        0.595
JT27_11940
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (1352 aa)
              0.558
JT27_11945
Surface antigen; Derived by automated computational analysis using gene prediction method- Protein Homology (592 aa)
              0.556
metG
Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 1 subfamily (689 aa)
              0.419
JT27_05960
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (1342 aa)
   
        0.412
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
Server load: low (9%) [HD]