STRINGSTRING
JT27_12065 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_12065" - Uncharacterized protein in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_12065Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (345 aa)    
Predicted Functional Partners:
JT27_12070
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (77 aa)
              0.761
JT27_12585
Porin; Derived by automated computational analysis using gene prediction method- Protein Homology (348 aa)
   
          0.556
JT27_13065
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (104 aa)
   
          0.552
JT27_13145
Integrating conjugative element protein; Derived by automated computational analysis using gene prediction method- Protein Homology (372 aa)
   
          0.485
JT27_14800
TadE family protein; Derived by automated computational analysis using gene prediction method- Protein Homology (145 aa)
   
          0.446
JT27_11825
4-oxalocrotonate tautomerase; 4-OT; member of subfamily 5; forms a dimer; the function in the Escherichia coli cell is unknown; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family (61 aa)
   
          0.444
JT27_14085
General secretion pathway protein GspI; Derived by automated computational analysis using gene prediction method- Protein Homology (119 aa)
   
          0.443
JT27_13135
Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (145 aa)
 
          0.440
JT27_13040
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (208 aa)
   
          0.431
JT27_13080
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (204 aa)
   
          0.418
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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