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JT27_12240 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_12240" - Uncharacterized protein in Alcaligenes faecalis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Databases
Textmining
[Homology]
Score
JT27_12240Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (83 aa)    
Predicted Functional Partners:
JT27_12235
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (283 aa)
              0.902
JT27_12245
N-acetyl-anhydromuranmyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method- Protein Homology (211 aa)
              0.901
ffh
Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual componen [...] (474 aa)
              0.740
JT27_10120
Lipoprotein; Derived by automated computational analysis using gene prediction method- Protein Homology (377 aa)
   
          0.519
JT27_13245
Lipoprotein; Derived by automated computational analysis using gene prediction method- Protein Homology (263 aa)
   
          0.487
JT27_14940
TPR repeat-containing protein PA0015; Derived by automated computational analysis using gene prediction method- Protein Homology (108 aa)
   
          0.486
JT27_19405
AsmA family protein 2; Derived by automated computational analysis using gene prediction method- Protein Homology (902 aa)
   
          0.455
JT27_04470
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (170 aa)
   
          0.442
JT27_04325
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (267 aa)
 
          0.429
JT27_19135
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (372 aa)
   
          0.408
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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