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JT27_12500 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_12500" - Ferric anguibactin-binding protein in Alcaligenes faecalis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
JT27_12500Ferric anguibactin-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (334 aa)    
Predicted Functional Partners:
JT27_12485
Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily (314 aa)
   
  0.997
JT27_12495
Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (258 aa)
 
   
  0.996
JT27_12490
Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily (313 aa)
 
   
  0.996
JT27_12480
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (588 aa)
 
          0.926
JT27_12475
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (595 aa)
 
          0.918
JT27_19775
Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily (338 aa)
 
 
  0.884
JT27_02690
Iron-siderophore ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily (350 aa)
 
 
  0.869
JT27_19780
ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (255 aa)
 
 
  0.840
JT27_02700
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (377 aa)
   
 
  0.827
JT27_02695
Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (261 aa)
   
 
  0.815
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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