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JT27_12680 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_12680" - LysR family transcriptional regulator in Alcaligenes faecalis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
JT27_12680LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (321 aa)    
Predicted Functional Partners:
recG
ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3’- to 5’- polarity. Unwinds branched duplex DNA (Y-DNA) (693 aa)
   
   
  0.829
JT27_12670
Endoribonuclease; Derived by automated computational analysis using gene prediction method- Protein Homology (128 aa)
              0.721
JT27_12685
Ferritin; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the Dps family (155 aa)
         
  0.648
JT27_19225
Alkyl hydroperoxide reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (187 aa)
         
  0.631
JT27_12665
Ferredoxin-NADP reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (258 aa)
         
  0.549
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (465 aa)
       
 
  0.540
JT27_03235
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (294 aa)
   
   
  0.478
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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