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JT27_13300 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_13300" - UPF0125 protein JT27_13300 in Alcaligenes faecalis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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[Homology]
Score
JT27_13300UPF0125 protein JT27_13300; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UPF0125 (RnfH) family (117 aa)    
Predicted Functional Partners:
JT27_13305
Cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology (144 aa)
   
   
  0.922
smpB
SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a "tag peptide", a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...] (154 aa)
   
        0.758
JT27_13290
Enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method- Protein Homology (375 aa)
              0.540
JT27_13295
Acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (382 aa)
              0.512
JT27_13285
3-hydroxyisobutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the 3-hydroxyisobutyrate dehydrogenase family (298 aa)
              0.413
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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