STRINGSTRING
JT27_13565 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_13565" - Spermidine synthase in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_13565Spermidine synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (253 aa)    
Predicted Functional Partners:
JT27_07740
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (194 aa)
   
          0.746
speE
Polyamine aminopropyltransferase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine (425 aa)
   
   
  0.716
JT27_16575
Glycosyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (586 aa)
   
        0.705
JT27_17620
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (136 aa)
   
          0.661
JT27_01950
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (104 aa)
   
     
  0.647
JT27_04555
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (115 aa)
   
          0.623
JT27_10120
Lipoprotein; Derived by automated computational analysis using gene prediction method- Protein Homology (377 aa)
   
          0.619
JT27_08550
Ribonuclease II; Derived by automated computational analysis using gene prediction method- Protein Homology (629 aa)
 
        0.617
JT27_13560
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (322 aa)
              0.589
JT27_14750
Zinc protease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the peptidase M16 family (946 aa)
     
   
  0.582
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
Server load: low (6%) [HD]