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JT27_13885 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_13885" - Deoxyribodipyrimidine photolyase in Alcaligenes faecalis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
JT27_13885Deoxyribodipyrimidine photolyase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the DNA photolyase family (466 aa)    
Predicted Functional Partners:
JT27_13880
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (192 aa)
              0.801
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (905 aa)
   
   
  0.727
htpG
Chaperone protein HtpG; Molecular chaperone. Has ATPase activity (634 aa)
     
   
  0.606
JT27_06885
Metal-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (258 aa)
 
        0.602
JT27_11575
6-O-methylguanine DNA methyltransferase; Regulates genes involved in the repair of alkylated DNA; repairs DNA containing 6-O-methylguanine; Derived by automated computational analysis using gene prediction method- Protein Homology (354 aa)
         
  0.598
ung
Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine (239 aa)
 
 
   
  0.586
hfq
RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs (78 aa)
           
  0.564
uvrC
UvrABC system protein C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5’ and 3’ sides of the lesion. The N-terminal half is responsible for the 3’ incision and the C-terminal half is responsible for the 5’ incision (607 aa)
   
   
  0.562
JT27_08315
Aromatic ring-cleaving dioxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (269 aa)
           
  0.549
AFA_04995
Beta-ketoacyl-ACP reductase; Catalyzes the formation of 3-hydroxybutyryl-CoA from acetoacetyl-CoA in polyhydroxyalkanoate synthesis; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family (245 aa)
           
  0.548
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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