STRINGSTRING
JT27_13980 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_13980" - Membrane protein in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_13980Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (111 aa)    
Predicted Functional Partners:
JT27_13975
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (228 aa)
 
   
  0.942
JT27_11225
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (240 aa)
   
          0.768
JT27_10720
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (235 aa)
   
          0.714
JT27_03895
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (133 aa)
   
          0.710
JT27_16725
Lipoprotein; Derived by automated computational analysis using gene prediction method- Protein Homology (215 aa)
   
          0.697
JT27_10810
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (164 aa)
   
          0.692
JT27_14750
Zinc protease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the peptidase M16 family (946 aa)
   
          0.677
JT27_08740
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (214 aa)
   
          0.664
JT27_09615
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (405 aa)
   
          0.646
JT27_06530
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (74 aa)
   
          0.636
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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