STRINGSTRING
JT27_14005 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_14005" - IclR family transcriptional regulator in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_14005IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (249 aa)    
Predicted Functional Partners:
JT27_05215
IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (269 aa)
   
          0.730
JT27_19985
IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (251 aa)
   
          0.721
JT27_14000
Damage-inducible protein; Derived by automated computational analysis using gene prediction method- Protein Homology (269 aa)
 
        0.638
JT27_13995
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (272 aa)
 
          0.629
JT27_09940
IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (260 aa)
   
          0.538
JT27_05035
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (246 aa)
   
          0.526
JT27_13990
Thiol-disulfide isomerase; Derived by automated computational analysis using gene prediction method- Protein Homology (129 aa)
 
          0.511
JT27_17650
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (258 aa)
   
          0.437
JT27_14015
Phasin (PHA-granule associated protein); Derived by automated computational analysis using gene prediction method- Protein Homology (199 aa)
 
          0.429
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
Server load: low (13%) [HD]