STRINGSTRING
JT27_14135 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_14135" - Uncharacterized protein in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_14135Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (429 aa)    
Predicted Functional Partners:
JT27_14140
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (1994 aa)
   
        0.850
JT27_20225
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology (370 aa)
 
  0.823
JT27_19285
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (381 aa)
 
  0.821
JT27_02065
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology (482 aa)
 
  0.814
JT27_05625
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology (455 aa)
 
  0.726
JT27_06730
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology (529 aa)
 
  0.721
JT27_14145
Lipoprotein PlpD; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ompA family (257 aa)
         
  0.630
JT27_05970
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology (646 aa)
 
 
  0.574
JT27_14150
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (182 aa)
              0.480
JT27_03655
Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method- Protein Homology (693 aa)
 
   
  0.462
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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