STRINGSTRING
JT27_14140 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_14140" - Uncharacterized protein in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_14140Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (1994 aa)    
Predicted Functional Partners:
JT27_14145
Lipoprotein PlpD; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ompA family (257 aa)
 
   
  0.901
JT27_14135
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (429 aa)
   
        0.850
JT27_05960
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (1342 aa)
         
  0.740
JT27_04560
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (1192 aa)
 
          0.605
JT27_03615
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (150 aa)
   
          0.569
JT27_14150
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (182 aa)
              0.480
JT27_14155
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (158 aa)
              0.441
JT27_07965
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (922 aa)
 
     
  0.428
JT27_07970
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (929 aa)
 
     
  0.423
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
Server load: low (9%) [HD]