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JT27_14250 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_14250" - RND transporter in Alcaligenes faecalis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
JT27_14250RND transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (357 aa)    
Predicted Functional Partners:
JT27_14245
Acriflavine resistance protein B; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family (1038 aa)
 
  0.975
JT27_14240
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (477 aa)
   
 
  0.880
JT27_14255
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (72 aa)
              0.845
JT27_19730
Multidrug transporter AcrB; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family (1025 aa)
 
  0.791
JT27_14260
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (165 aa)
         
  0.618
JT27_01715
Secretion protein HlyD; Derived by automated computational analysis using gene prediction method- Protein Homology (380 aa)
 
 
 
  0.591
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides (652 aa)
   
 
  0.564
JT27_12530
Efflux pump membrane transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (1058 aa)
 
  0.539
JT27_08245
Multidrug transporter; Part of a tripartite efflux system composed of MdtA, MdtB and MdtC which confers resistance against novobiocin and deoxycholate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family (1034 aa)
 
  0.531
JT27_08240
Multidrug transporter; Part of a tripartite efflux system composed of MdtA, MdtB and MdtC which confers resistance against novobiocin and deoxycholate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family (1028 aa)
 
  0.497
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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