STRINGSTRING
JT27_14280 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_14280" - Ferredoxin in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_14280Ferredoxin; Derived by automated computational analysis using gene prediction method- Protein Homology (350 aa)    
Predicted Functional Partners:
JT27_14285
Aminobenzoate oxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (317 aa)
              0.858
JT27_14275
Glutamine amidotransferase; Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group; Derived by automated computational analysis using gene prediction method- Protein Homology (240 aa)
              0.748
pdxK
Pyridoxal kinase; Catalyzes the formation of pyridoxal 5’-phosphate from pyridoxal; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the pyridoxine kinase family (289 aa)
              0.742
JT27_06325
Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (401 aa)
   
          0.582
JT27_14265
Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the BCCT transporter (TC 2.A.15) family (663 aa)
              0.532
nuoI
NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (162 aa)
       
 
  0.419
ispG
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin); Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate; Belongs to the IspG family (428 aa)
       
      0.416
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
Server load: low (10%) [HD]