STRINGSTRING
JT27_14380 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_14380" - Short-chain dehydrogenase in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_14380Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (250 aa)    
Predicted Functional Partners:
JT27_14375
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (250 aa)
 
       
0.563
JT27_16290
3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP (410 aa)
 
 
  0.555
JT27_14365
Acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method- Protein Homology (394 aa)
 
      0.498
JT27_14370
3-hydroxyalkanoate synthetase; Derived by automated computational analysis using gene prediction method- Protein Homology (915 aa)
              0.491
JT27_14360
Acetoacetyl-CoA reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (248 aa)
 
       
0.471
JT27_02595
Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology (592 aa)
   
 
      0.446
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
Server load: low (8%) [HD]