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JT27_14445 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_14445" - Phytochrome sensor protein in Alcaligenes faecalis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
JT27_14445Phytochrome sensor protein; Derived by automated computational analysis using gene prediction method- Protein Homology (238 aa)    
Predicted Functional Partners:
JT27_14440
Fimbrial assembly protein; Derived by automated computational analysis using gene prediction method- Protein Homology (891 aa)
 
  0.957
JT27_14450
Adhesin; Derived by automated computational analysis using gene prediction method- Protein Homology (187 aa)
   
 
  0.780
JT27_14455
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (393 aa)
   
 
  0.617
JT27_01640
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (132 aa)
   
          0.614
JT27_14435
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (920 aa)
 
          0.602
JT27_14425
LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (219 aa)
 
 
 
  0.540
JT27_00470
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (1106 aa)
   
 
      0.526
JT27_10915
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (378 aa)
   
 
  0.513
JT27_14430
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (1039 aa)
 
   
  0.498
JT27_02175
Hydrolase Nlp/P60; Derived by automated computational analysis using gene prediction method- Protein Homology (260 aa)
   
          0.448
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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