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JT27_14785 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_14785" - ShlB-type family protein in Alcaligenes faecalis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_14785ShlB-type family protein; Derived by automated computational analysis using gene prediction method- Protein Homology (565 aa)    
Predicted Functional Partners:
JT27_14780
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (563 aa)
 
     
  0.855
JT27_14770
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (650 aa)
 
          0.797
JT27_14820
Pilus assembly protein CpaF; Derived by automated computational analysis using gene prediction method- Protein Homology (386 aa)
   
          0.719
JT27_05960
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (1342 aa)
 
     
  0.715
JT27_14865
Lipoprotein; Derived by automated computational analysis using gene prediction method- Protein Homology (239 aa)
   
          0.712
JT27_05750
Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (364 aa)
 
     
  0.646
JT27_14835
Type II secretion protein F; Derived by automated computational analysis using gene prediction method- Protein Homology (326 aa)
   
     
  0.619
JT27_14795
Pilus assembly protein; Derived by automated computational analysis using gene prediction method- Protein Homology (167 aa)
 
          0.582
JT27_14855
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (671 aa)
   
          0.565
JT27_11215
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (129 aa)
   
          0.559
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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