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JT27_14825 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_14825" - Pilus assembly protein CpaF in Alcaligenes faecalis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
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[Homology]
Score
JT27_14825Pilus assembly protein CpaF; Derived by automated computational analysis using gene prediction method- Protein Homology (414 aa)    
Predicted Functional Partners:
JT27_14835
Type II secretion protein F; Derived by automated computational analysis using gene prediction method- Protein Homology (326 aa)
 
   
  0.982
JT27_14830
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (307 aa)
 
   
  0.982
JT27_14820
Pilus assembly protein CpaF; Derived by automated computational analysis using gene prediction method- Protein Homology (386 aa)
 
   
  0.879
JT27_14815
Type II secretion system protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the GSP D family (444 aa)
 
   
  0.867
JT27_14810
Pilus assembly protein CpaB; Derived by automated computational analysis using gene prediction method- Protein Homology (317 aa)
 
   
  0.861
JT27_17660
Type II secretion system protein F; Derived by automated computational analysis using gene prediction method- Protein Homology (288 aa)
 
   
  0.842
JT27_17665
Type II secretion protein F; Derived by automated computational analysis using gene prediction method- Protein Homology (281 aa)
 
   
  0.842
JT27_17680
Flp pilus assembly protein; Derived by automated computational analysis using gene prediction method- Protein Homology (293 aa)
 
   
  0.790
JT27_14790
Pili assembly chaperone; Derived by automated computational analysis using gene prediction method- Protein Homology (60 aa)
 
     
  0.651
JT27_17675
Secretion protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the GSP D family (442 aa)
 
   
  0.598
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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