STRINGSTRING
JT27_15055 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_15055" - Peptide ABC transporter ATPase in Alcaligenes faecalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT27_15055Peptide ABC transporter ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ABC transporter superfamily (628 aa)    
Predicted Functional Partners:
JT27_15050
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (294 aa)
 
  0.979
JT27_15045
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (337 aa)
 
  0.979
JT27_15040
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (507 aa)
   
  0.875
AFA_08915
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (313 aa)
 
  0.810
JT27_04840
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (304 aa)
 
  0.799
JT27_09700
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (484 aa)
 
  0.797
JT27_09705
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (325 aa)
 
 
  0.794
JT27_04835
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (328 aa)
 
  0.790
JT27_15060
Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (437 aa)
   
        0.751
JT27_09710
Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (728 aa)
 
   
  0.543
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
Server load: low (10%) [HD]