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JT27_15220 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_15220" - Membrane protein in Alcaligenes faecalis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
JT27_15220Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (211 aa)    
Predicted Functional Partners:
bamB
Outer membrane protein assembly factor BamB; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (392 aa)
 
 
  0.961
hisS
Histidine--tRNA ligase; Derived by automated computational analysis using gene prediction method- Protein Homology (427 aa)
 
        0.960
der
GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis (452 aa)
   
   
  0.909
hisC
Histidinol-phosphate aminotransferase; Catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily (360 aa)
              0.853
ispG
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin); Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate; Belongs to the IspG family (428 aa)
   
        0.834
rlmN
Dual-specificity RNA methyltransferase RlmN; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs (382 aa)
   
        0.812
JT27_15205
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (164 aa)
 
        0.799
hfq
RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs (78 aa)
              0.712
JT27_15250
Protein HflK; HflC and HflK could encode or regulate a protease (438 aa)
 
        0.694
JT27_15255
Protein HflC; HflC and HflK could regulate a protease (295 aa)
 
        0.684
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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