STRINGSTRING
JT27_16170 protein (Alcaligenes faecalis) - STRING interaction network
"JT27_16170" - Ferredoxin in Alcaligenes faecalis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
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[Homology]
Score
JT27_16170Ferredoxin; Part of a membrane complex involved in electron transport (213 aa)    
Predicted Functional Partners:
nth
Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination, leaving a 3’-terminal unsaturated sugar and a product with a terminal 5’-phosphate (212 aa)
   
   
  0.936
JT27_16175
Esterase; Derived by automated computational analysis using gene prediction method- Protein Homology (407 aa)
              0.795
JT27_16180
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions (107 aa)
 
     
  0.695
JT27_06855
Peptidase; Derived by automated computational analysis using gene prediction method- Protein Homology (141 aa)
   
          0.669
metG
Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 1 subfamily (689 aa)
 
          0.637
bamE
Outer membrane protein assembly factor BamE; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (195 aa)
   
          0.552
lpxH
UDP-2,3-diacylglucosamine hydrolase; Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell (266 aa)
   
          0.552
JT27_10325
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (198 aa)
   
          0.542
JT27_16520
DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method- Protein Homology (353 aa)
 
        0.537
JT27_16255
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (173 aa)
   
        0.497
Your Current Organism:
Alcaligenes faecalis
NCBI taxonomy Id: 511
Other names: A. faecalis, ATCC 8750, Alcaligenes faecalis, Alcaligenes sp. BP11, CIP 55.84, CIP 60.80, DSM 30030, IAM 12369, IFO 13111, JCM 20522, JCM 20663, NBRC 13111, NCAIM B.01104, NCIMB 8156, NCTC 11953
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